Sashimi viewer visualized transcriptome RNA-seq coverage data alongside splice junction-spanning sequence reads, using compressed intron genomic coordinates.

Relevant R version info:

  • R version 3.6.0 (2019-04-26)
  • jampack:
  • splicejam:
  • jamba:
  • colorjam:
  • farrisdata:
  • ggplot2: 3.3.2
  • plotly: 4.9.2

Plot Parameters

Sashimi Plot

  • Plot Style:

    Axis Settings:
    Exon Models:

Sample Selection and Order

Select samples by dragging them down to the Display Samples section.